Seminarium Zakładu Biofizyki
sala nr 3136 im. Prof. Jana Samsonowicza, al. Żwirki i Wigury 93
mgr Maciej Dziubiński (IFD UW)
The role of a part of a protein - physical description, using the generalized cumulant expansion method
I will present the problem of describing a part of a protein, and propose a methodology for such a description. The method will be general (any given subset of amino-acids may be considered), require data from a simple MD simulation, and allow us to check hypotheses of the form "this part of the protein facilitates the state in which the protein can bind to the ligand”.